Dictionary compression lectures
Published:
I will give 4 lectures (8 hours) on “Dictionary compression” in the course Data Compression Techniques held by Prof. Simon J. Puglisi.
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New paper accepted at the Data Compression Conference 2022(DCC 22)
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Our paper titled “Efficient CSTs for Terabyte-Sized Data” I co-authored with Marco Oliva, Davide Cenzato, Zsuzsanna Lipták, Travis Gagie, and Christina Boucher has been accepted at the Data Compression Conference 2022 (DCC 22).
Invited speaker at Pangenomics Bio Hacking 2021
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Published:
I will be an invited speaker at the Pangenomics Bio Hacking 2021 and I will talk about my recent work on pangenomics.
New paper accepted at the 28th International Symposium on String Processing and Information Retrieval (SPIRE 2021)
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Our paper titled “Computing the original eBWT faster, simpler, and with less memory” I co-authored with Christina Boucher, Davide Cenzato, Zsuzsanna Lipták, and Marinella Sciortino has been accepted at the 28th International Symposium on String Processing and Information Retrieval (SPIRE 2021).
New paper published in iScience
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Our paper titled, “Pan-genomic Matching Statistics for Targeted Nanopore Sequencing” I co-authored with Omar Ahmed, Sam Kovaka, Michael C. Schatz, Travis Gagie, Christina Boucher, and Ben Langmead, has been published in iScience. [link]