New paper accepted at the 20th Workshop on Algorithms in Bioinformatics (WABI) 2020

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Published: June 29, 2020

Our paper titled “Fast and Efficient Rmap Assembly using the Bi-labelled de Bruijn Graph” I co-authored with Kingshuk Mukherjee, Leena Salmela, and Christina Boucher has been accepted at the 20th Workshop on Algorithms in Bioinformatics (WABI) 2020.

New paper accepted at the Data Compression Conference 2022(DCC 22)

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Published: January 06, 2022

Our paper titled “Efficient CSTs for Terabyte-Sized Data” I co-authored with Marco Oliva, Davide Cenzato, Zsuzsanna Lipták, Travis Gagie, and Christina Boucher has been accepted at the Data Compression Conference 2022 (DCC 22).

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Published: November 23, 2021

I will be an invited speaker at the Pangenomics Bio Hacking 2021 and I will talk about my recent work on pangenomics.

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Published: July 14, 2021

Our paper titled “Computing the original eBWT faster, simpler, and with less memory” I co-authored with Christina Boucher, Davide Cenzato, Zsuzsanna Lipták, and Marinella Sciortino has been accepted at the 28th International Symposium on String Processing and Information Retrieval (SPIRE 2021).

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Published: June 25, 2021

Our paper titled, “Pan-genomic Matching Statistics for Targeted Nanopore Sequencing” I co-authored with Omar Ahmed, Sam Kovaka, Michael C. Schatz, Travis Gagie, Christina Boucher, and Ben Langmead, has been published in iScience. [link]