New paper published in the Journal of Experimental Algorithmics (JEA)

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Published: December 31, 2020

Our paper titled “Pattern Discovery in Colored Strings” I co-authored with Zsuzsanna Lipták and Simon J. Puglisi has been published in the Journal of Experimental Algorithmics (JEA). [link]

New paper accepted at the Data Compression Conference 2022(DCC 22)

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Published: January 06, 2022

Our paper titled “Efficient CSTs for Terabyte-Sized Data” I co-authored with Marco Oliva, Davide Cenzato, Zsuzsanna Lipták, Travis Gagie, and Christina Boucher has been accepted at the Data Compression Conference 2022 (DCC 22).

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Published: November 23, 2021

I will be an invited speaker at the Pangenomics Bio Hacking 2021 and I will talk about my recent work on pangenomics.

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Published: July 14, 2021

Our paper titled “Computing the original eBWT faster, simpler, and with less memory” I co-authored with Christina Boucher, Davide Cenzato, Zsuzsanna Lipták, and Marinella Sciortino has been accepted at the 28th International Symposium on String Processing and Information Retrieval (SPIRE 2021).

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Published: June 25, 2021

Our paper titled, “Pan-genomic Matching Statistics for Targeted Nanopore Sequencing” I co-authored with Omar Ahmed, Sam Kovaka, Michael C. Schatz, Travis Gagie, Christina Boucher, and Ben Langmead, has been published in iScience. [link]