New paper accepted at the 18th Symposium on Experimental Algorithms (SEA) 2020

less than 1 minute read

Published: March 23, 2020

Our paper titled “Pattern Discovery in Colored Strings” I co-authored with Zsuzsanna Lipták and Simon J. Puglisi has been accepted at the 18th Symposium on Experimental Algorithms (SEA 2020).

New paper accepted at the Data Compression Conference 2022(DCC 22)

less than 1 minute read

Published: January 06, 2022

Our paper titled “Efficient CSTs for Terabyte-Sized Data” I co-authored with Marco Oliva, Davide Cenzato, Zsuzsanna Lipták, Travis Gagie, and Christina Boucher has been accepted at the Data Compression Conference 2022 (DCC 22).

less than 1 minute read

Published: November 23, 2021

I will be an invited speaker at the Pangenomics Bio Hacking 2021 and I will talk about my recent work on pangenomics.

less than 1 minute read

Published: July 14, 2021

Our paper titled “Computing the original eBWT faster, simpler, and with less memory” I co-authored with Christina Boucher, Davide Cenzato, Zsuzsanna Lipták, and Marinella Sciortino has been accepted at the 28th International Symposium on String Processing and Information Retrieval (SPIRE 2021).

less than 1 minute read

Published: June 25, 2021

Our paper titled, “Pan-genomic Matching Statistics for Targeted Nanopore Sequencing” I co-authored with Omar Ahmed, Sam Kovaka, Michael C. Schatz, Travis Gagie, Christina Boucher, and Ben Langmead, has been published in iScience. [link]